STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA24Spermatogenesis associated 24. (205 aa)    
Predicted Functional Partners:
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
      
 0.699
SMNDC1
Survival motor neuron domain containing 1.
      
 0.695
FAM13B
Family with sequence similarity 13 member B.
      
 0.693
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
      
 0.676
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.630
CBX1
Chromobox 1.
      
 0.593
SMIM33
Small integral membrane protein 33.
   
  
 0.570
SPATA21
Spermatogenesis associated 21.
   
  
 0.567
BRD8
Bromodomain containing 8.
      
 0.564
ATP10A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.562
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.