STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDRGK1DDRGK domain containing 1. (315 aa)    
Predicted Functional Partners:
UFL1
UFM1 specific ligase 1.
    
 
 0.923
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
 
 0.918
TGM6
Transglutaminase 6.
   
  
 0.710
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
    
 
 0.698
RAB39B
RAB39B, member RAS oncogene family.
      
 0.660
COASY
Coenzyme A synthase.
   
  
 0.652
PRAF2
WD repeat domain 45.
   
  
 0.651
PACRG
Parkin coregulated.
      
 0.636
VPS13A
Vacuolar protein sorting 13 homolog A.
      
 0.632
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.631
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.