STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTHRC1Collagen triple helix repeat containing 1. (244 aa)    
Predicted Functional Partners:
TCAF1
Peptidase M60 domain-containing protein.
      
 0.731
CILP2
Cartilage intermediate layer protein 2.
      
 0.636
MATN3
Matrilin 3.
   
  
 0.589
LOXL3
Lysyl oxidase like 3.
      
 0.566
HEBP2
Heme binding protein 2.
      
 0.538
ZNF182
Zinc finger protein 182.
      
 0.510
APCDD1L
APC down-regulated 1 like.
      
 0.483
POSTN
Periostin.
   
  
 0.480
PDGFRL
Platelet derived growth factor receptor like.
      
 0.479
CAMK2N2
Calcium/calmodulin dependent protein kinase II inhibitor 2.
      
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.