STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD9PDZ domain containing 9. (262 aa)    
Predicted Functional Partners:
VWA3A
Von Willebrand factor A domain containing 3A.
      
 0.906
FAM222B
Family with sequence similarity 222 member B.
      
 0.889
CEP152
Centrosomal protein 152.
      
 0.837
OR2K2
Olfactory receptor.
   
  
 0.787
PIK3C2A
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
   
  
 0.689
CFAP46
Cilia and flagella associated protein 46.
      
 0.671
TMED6
GOLD domain-containing protein.
      
 0.663
SLC1A6
Amino acid transporter.
      
 0.652
OVOL1
Ovo like transcriptional repressor 1.
      
 0.651
PRG4
Uncharacterized protein.
      
 0.639
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.