STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100069407Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.535
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.535
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.535
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.535
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.534
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.450
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.449
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.430
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.430
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.427
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.