STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP74Cilia and flagella associated protein 74. (1645 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.786
C13H7orf50
Chromosome 13 C7orf50 homolog.
      
 0.661
LOC100059180
Uncharacterized protein.
   
 
 0.628
CFAP221
Cilia and flagella associated protein 221.
   
 
 0.626
SLC22A23
Solute carrier family 22 member 23.
      
 0.625
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 
 0.573
LRRC23
Leucine rich repeat containing 23.
    
 
 0.567
CCDC146
Coiled-coil domain containing 146.
   
  
 0.562
SPAG17
Sperm associated antigen 17.
   
 
 0.561
LRRC46
Leucine rich repeat containing 46.
    
 
 0.557
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.