STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL3ELAV-like protein; Belongs to the RRM elav family. (367 aa)    
Predicted Functional Partners:
SOX10
SRY-box transcription factor 10.
   
 
 0.630
FAM98A
Family with sequence similarity 98 member A.
   
  
 0.627
TRA2A
Transformer 2 alpha homolog.
  
 0.613
EWSR1
EWS RNA binding protein 1.
   
 
 0.602
DHX36
DEAH-box helicase 36.
   
 0.587
RBM24
RNA binding motif protein 24.
  
 
 
 0.577
RBFOX3
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
 0.572
FGFBP3
Fibroblast growth factor binding protein 3.
      
 0.563
PRPF3
Pre-mRNA processing factor 3.
      
 0.540
ELAVL4
ELAV-like protein; Belongs to the RRM elav family.
  
  
0.540
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.