STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C23H9orf85Chromosome 23 C9orf85 homolog. (157 aa)    
Predicted Functional Partners:
FAM49A
Family with sequence similarity 49 member A.
   
  
 0.487
HEATR9
HEAT repeat containing 9.
      
 0.482
FAM189A1
Family with sequence similarity 189 member A1.
      
 0.482
NRIP2
Nuclear receptor interacting protein 2.
      
 0.481
RHNO1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
      
 0.480
IQSEC3
IQ motif and Sec7 domain 3.
      
 0.478
GAS2L2
Growth arrest specific 2 like 2.
      
 0.477
RASL10B
RAS like family 10 member B.
      
 0.477
FOCAD
Focadhesin.
      
 0.477
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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