STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (246 aa)    
Predicted Functional Partners:
TMEM126A
Transmembrane protein 126A.
   
  
 0.854
C31H6orf120
Uncharacterized protein.
      
 0.822
RNF185
Ring finger protein 185.
   
 
 0.815
HERPUD2
HERPUD family member 2.
      
 0.770
RNF170
Ring finger protein 170.
    
 
 0.746
FAM3C
Family with sequence similarity 3 member C.
   
  
 0.741
RNF5
Ring finger protein 5.
   
 
 0.734
TMEM259
Transmembrane protein 259.
    
 
 0.725
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
  
 0.672
NDC1
NDC1 transmembrane nucleoporin.
      
 0.670
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.