STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A1Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1202 aa)    
Predicted Functional Partners:
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
 
  
 
 0.700
PCNX3
Pecanex 3.
   
    0.601
DNAH1
Dynein axonemal heavy chain 1.
      
 0.574
NHLRC2
NHL repeat containing 2.
    
 
 0.561
ATP5MC2
ATP synthase membrane subunit c locus 2; Belongs to the ATPase C chain family.
   
 
 0.536
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
   
 
 0.527
RMDN3
Regulator of microtubule dynamics 3.
    
 0.516
SGSM3
Small G protein signaling modulator 3.
   
  
 0.502
BRPF1
Bromodomain and PHD finger containing 1.
   
  
 0.497
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
    
 
 0.493
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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