STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF4Transmembrane 4 L six family member 4. (202 aa)    
Predicted Functional Partners:
TM4SF20
Transmembrane 4 L six family member 20.
   
  
 0.812
ABHD15
Abhydrolase domain containing 15.
   
  
 0.807
GPA33
Glycoprotein A33.
      
 0.691
PLLP
Plasmolipin.
   
  
 0.666
ASGR1
Asialoglycoprotein receptor 1.
   
  
 0.638
GJB3
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.630
GAS2L2
Growth arrest specific 2 like 2.
      
 0.616
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
      
 0.616
CFAP58
Cilia and flagella associated protein 58.
   
  
 0.616
CAPN14
Uncharacterized protein; Belongs to the peptidase C2 family.
      
 0.597
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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