STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YDJCYdjC chitooligosaccharide deacetylase homolog. (324 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle 16.
    
 
 0.568
PLEKHM3
Pleckstrin homology domain containing M3.
      
 0.481
ATXN7L1
Ataxin 7 like 1.
      
 0.481
DCAF1
DDB1 and CUL4 associated factor 1.
      
 0.477
EMP2
Epithelial membrane protein 2; Functions as a key regulator of cell membrane composition by regulating proteins surface expression. Also, plays a role in regulation of processes including cell migration, cell proliferation, cell contraction and cell adhesion; Belongs to the PMP-22/EMP/MP20 family.
      
 0.476
ZYG11B
Zyg-11 family member B, cell cycle regulator.
      
 0.472
WDR47
WD repeat domain 47.
   
  
 0.472
KL
Klotho.
  
 
 0.447
GBA3
Glucosylceramidase beta 3; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.447
LCTL
Lactase like; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.447
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.