STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF4Serine and arginine rich splicing factor 4. (501 aa)    
Predicted Functional Partners:
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.947
TRA2B
Transformer 2 beta homolog.
   
 0.823
SRSF10
Serine and arginine rich splicing factor 10.
   
0.820
NXF1
Nuclear RNA export factor 1.
   
 0.815
LOC100067224
TAP-C domain-containing protein.
   
 0.815
ENSECAP00000047982
Uncharacterized protein.
   
 0.815
LOC100060201
Uncharacterized protein.
   
 0.815
SRSF2
RRM domain-containing protein.
   
0.807
ALYREF
Aly/REF export factor.
   
 0.804
HNRNPA1
Heterogeneous nuclear ribonucleoprotein A1.
   
 0.787
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.