STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZIBCXXC motif containing zinc binding protein. (237 aa)    
Predicted Functional Partners:
RCCD1
RCC1 domain containing 1.
   
  
 0.562
ZC3H8
Zinc finger CCCH-type containing 8.
   
  
 0.496
LRRC42
Leucine rich repeat containing 42.
      
 0.482
PHC2
Polyhomeotic homolog 2.
   
  
 0.481
MPLKIP
Uncharacterized protein.
   
  
 0.481
PBDC1
Polysaccharide biosynthesis domain containing 1.
   
  
 0.480
ARHGEF16
Rho guanine nucleotide exchange factor 16.
      
 0.478
TMEM131
Transmembrane protein 131.
      
 0.477
DCPS
Decapping enzyme, scavenger.
   
  
 0.477
PHYHD1
Uncharacterized protein.
      
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.