STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1SH3 domain containing ring finger 1. (886 aa)    
Predicted Functional Partners:
CSKMT
Citrate synthase lysine methyltransferase.
      
 0.814
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
    
 0.745
BLM
BLM RecQ like helicase.
    
 
 0.717
SYNRG
Synergin gamma.
    
 
 0.697
IFRD2
Interferon related developmental regulator 2.
      
 0.694
SNX14
Sorting nexin 14.
      
 0.679
AMER3
APC membrane recruitment protein 3.
      
 0.675
FBXL5
F-box and leucine rich repeat protein 5.
      
 0.658
TMEM63B
Transmembrane protein 63B.
      
 0.630
KCNB2
Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family.
    
 
 0.630
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.