Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATP5PO | COX4I1 | ENSECAP00000007141 | ENSECAP00000009694 | Uncharacterized protein. | Cytochrome c oxidase subunit 4I1. | 0.798 |
ATP5PO | COX5B | ENSECAP00000007141 | ENSECAP00000006049 | Uncharacterized protein. | Cytochrome c oxidase subunit 5B. | 0.961 |
ATP5PO | CYC1 | ENSECAP00000007141 | ENSECAP00000018094 | Uncharacterized protein. | Cytochrome c1. | 0.961 |
ATP5PO | LOC100051878 | ENSECAP00000007141 | ENSECAP00000016610 | Uncharacterized protein. | Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family. | 0.758 |
ATP5PO | LOC100147519 | ENSECAP00000007141 | ENSECAP00000019930 | Uncharacterized protein. | Uncharacterized protein. | 0.656 |
ATP5PO | NDUFB8 | ENSECAP00000007141 | ENSECAP00000008049 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.837 |
ATP5PO | NDUFS1 | ENSECAP00000007141 | ENSECAP00000013490 | Uncharacterized protein. | NADH:ubiquinone oxidoreductase core subunit S1. | 0.664 |
ATP5PO | UQCRB | ENSECAP00000007141 | ENSECAP00000007737 | Uncharacterized protein. | Ubiquinol-cytochrome c reductase binding protein. | 0.934 |
ATP5PO | UQCRC2 | ENSECAP00000007141 | ENSECAP00000031574 | Uncharacterized protein. | Ubiquinol-cytochrome c reductase core protein 2; Belongs to the peptidase M16 family. | 0.999 |
ATP5PO | UQCRFS1 | ENSECAP00000007141 | ENSECAP00000003275 | Uncharacterized protein. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.960 |
COX4I1 | ATP5PO | ENSECAP00000009694 | ENSECAP00000007141 | Cytochrome c oxidase subunit 4I1. | Uncharacterized protein. | 0.798 |
COX4I1 | COX5B | ENSECAP00000009694 | ENSECAP00000006049 | Cytochrome c oxidase subunit 4I1. | Cytochrome c oxidase subunit 5B. | 0.999 |
COX4I1 | CYC1 | ENSECAP00000009694 | ENSECAP00000018094 | Cytochrome c oxidase subunit 4I1. | Cytochrome c1. | 0.999 |
COX4I1 | LOC100051878 | ENSECAP00000009694 | ENSECAP00000016610 | Cytochrome c oxidase subunit 4I1. | Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family. | 0.998 |
COX4I1 | LOC100147519 | ENSECAP00000009694 | ENSECAP00000019930 | Cytochrome c oxidase subunit 4I1. | Uncharacterized protein. | 0.998 |
COX4I1 | NDUFB8 | ENSECAP00000009694 | ENSECAP00000008049 | Cytochrome c oxidase subunit 4I1. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.994 |
COX4I1 | NDUFS1 | ENSECAP00000009694 | ENSECAP00000013490 | Cytochrome c oxidase subunit 4I1. | NADH:ubiquinone oxidoreductase core subunit S1. | 0.984 |
COX4I1 | UQCRB | ENSECAP00000009694 | ENSECAP00000007737 | Cytochrome c oxidase subunit 4I1. | Ubiquinol-cytochrome c reductase binding protein. | 0.999 |
COX4I1 | UQCRC2 | ENSECAP00000009694 | ENSECAP00000031574 | Cytochrome c oxidase subunit 4I1. | Ubiquinol-cytochrome c reductase core protein 2; Belongs to the peptidase M16 family. | 0.999 |
COX4I1 | UQCRFS1 | ENSECAP00000009694 | ENSECAP00000003275 | Cytochrome c oxidase subunit 4I1. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
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