STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT4Zinc finger matrin-type 4. (229 aa)    
Predicted Functional Partners:
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.850
BRF2
RAB11 family interacting protein 1.
      
 0.711
ITPRID1
ITPR interacting domain containing 1.
      
 0.672
TM2D2
TM2 domain containing 2.
      
 0.667
ADAM18
ADAM metallopeptidase domain 18.
      
 0.649
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.637
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.569
PLPBP
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
      
 0.563
EFCAB5
EF-hand calcium binding domain 5.
   
  
 0.547
WRN
WRN RecQ like helicase.
   
  
 0.533
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.