STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8BTBC1 domain family member 8B. (1120 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 
 0.840
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 
 0.834
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
   
 
 0.812
CDC16
Cell division cycle 16.
      
 0.696
DNM1
Dynamin 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.616
SH3GL2
SH3 domain containing GRB2 like 2, endophilin A1.
   
 
 0.609
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.592
RAB25
RAB25, member RAS oncogene family.
   
 0.562
DNM2
Dynamin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.548
ARL8B
ADP ribosylation factor like GTPase 8B; Belongs to the small GTPase superfamily. Arf family.
    
 0.527
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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