STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD1Low density lipoprotein receptor class A domain containing 1. (204 aa)    
Predicted Functional Partners:
SHISA8
Shisa family member 8.
      
 0.836
GAK
Cyclin G associated kinase.
   
 0.831
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.813
ENSECAP00000045011
Uncharacterized protein.
   
    0.806
C20orf85
Uncharacterized protein.
   
    0.799
CDHR3
Cadherin related family member 3.
    
 
 0.711
TMEM212
Transmembrane protein 212.
  
 
 0.711
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.703
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
   
  
 0.693
GAS2L2
Growth arrest specific 2 like 2.
   
 0.688
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.