STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB9BRAB9B, member RAS oncogene family. (201 aa)    
Predicted Functional Partners:
GCC2
GRIP and coiled-coil domain containing 2.
     
 0.954
RAB9A
Ras-related protein Rab-9A-like protein.
  
  
0.938
PLEKHM2
Pleckstrin homology and RUN domain containing M2.
     
  0.900
DENND2D
DENN domain containing 2D.
     
 0.879
DENND2C
DENN domain containing 2C.
     
 0.872
DENND2B
Suppression of tumorigenicity 5.
     
 0.872
DENND2A
DENN domain containing 2A.
     
 0.847
RHOBTB3
Rho related BTB domain containing 3.
   
 0.820
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.785
CCZ1
Uncharacterized protein.
    
 0.771
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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