STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106780831Uncharacterized protein. (577 aa)    
Predicted Functional Partners:
ACADS
Acyl-CoA dehydrogenase short chain.
 
 
 0.935
LOC100057758
Uncharacterized protein.
  
  
 
0.900
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 0.725
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.714
LOC111774427
Uncharacterized protein.
      
 0.559
CRYL1
Crystallin lambda 1.
  
 
 0.534
ADHFE1
Alcohol dehydrogenase iron containing 1.
  
 
 0.511
ECHDC1
Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.500
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.499
CARTPT
CART prepropeptide.
  
 
 0.485
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.