STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD1Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1. (357 aa)    
Predicted Functional Partners:
SLC25A32
Solute carrier family 25 member 32; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.902
PUS7
Pseudouridine synthase 7.
     
 0.860
PIK3C2G
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.
   
  
 0.768
ITPKC
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.646
SCAF11
SR-related CTD associated factor 11.
      
 0.631
KLHL8
Kelch like family member 8.
    
 
 0.627
MAPRE1
Microtubule associated protein RP/EB family member 1.
   
  
 0.578
ZKSCAN1
Uncharacterized protein.
      
 0.539
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
   
  
 0.491
CCDC42
Coiled-coil domain containing 42.
      
 0.489
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.