STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSFCathepsin F; Belongs to the peptidase C1 family. (440 aa)    
Predicted Functional Partners:
CTSD
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.885
CLN5
Uncharacterized protein.
   
  
 0.728
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
0.722
CLN3
Battenin.
   
  
 0.719
BTD
Biotinidase.
   
 0.717
DPP7
Dipeptidyl peptidase 7.
   
  
 0.697
CLN6
CLN6 transmembrane ER protein.
   
 
 0.678
NECAP2
NECAP endocytosis associated 2.
      
 0.672
ENSECAP00000027703
NTR domain-containing protein.
     
 0.666
GRN
Antimicrobial peptide eNAP-1; Has antimicrobial activity against Gram-negative and Gram- positive bacteria; Belongs to the granulin family.
   
 0.647
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.