STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSMBBeta-microseminoprotein. (129 aa)    
Predicted Functional Partners:
ACP3
Acid phosphatase, prostate; Belongs to the histidine acid phosphatase family.
   
 
 0.911
SMAP1
Small ArfGAP 1.
      
 0.712
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.658
TBCD
Tubulin folding cofactor D.
      
 0.636
CLSTN1
Calsyntenin 1.
      
 0.626
SLC45A3
Solute carrier family 45 member 3.
      
 0.583
AVEN
Apoptosis and caspase activation inhibitor.
      
 0.568
UPK3B
Uroplakin 3B.
      
 0.545
DENND5B
DENN domain containing 5B.
      
 0.537
APOF
Apolipoprotein F.
      
 0.518
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.