STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFOD1Glucose-fructose oxidoreductase domain containing 1. (390 aa)    
Predicted Functional Partners:
SV2A
Synaptic vesicle glycoprotein 2A.
   
  
 0.772
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.704
RGN
Regucalcin.
  
 
 0.700
KARS1
Lysine--tRNA ligase.
  
    0.621
SORD
Sorbitol dehydrogenase.
  
 
 0.545
GAS7
Growth arrest specific 7.
   
 0.535
GALK1
Galactokinase 1.
  
 
 0.510
GALK2
Galactokinase 2.
  
 
 0.510
H2AFY2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
  
 0.504
HAO1
Hydroxyacid oxidase 1.
  
  
 0.499
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.