STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3H16orf70Chromosome 3 C16orf70 homolog. (530 aa)    
Predicted Functional Partners:
BCAS3
BCAS3 microtubule associated cell migration factor.
   
 
 0.899
WDR45B
WD repeat domain 45B.
   
  
 0.804
PRAF2
WD repeat domain 45.
   
  
 0.730
ZFYVE1
Zinc finger FYVE-type containing 1.
   
  
 0.689
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 
 0.629
PEF1
Penta-EF-hand domain containing 1.
   
  
 0.578
ATG2A
Autophagy related 2A.
   
  
 0.571
SAR1B
Secretion associated Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family.
   
  
 0.565
PLET1
Uncharacterized protein.
      
 0.564
ATG2B
Autophagy related 2B.
   
  
 0.553
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.