STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM4BRNA binding motif protein 4B. (359 aa)    
Predicted Functional Partners:
OVCA2
OVCA2 serine hydrolase domain containing.
   
  
 0.775
MAATS1
MYCBP associated and testis expressed 1.
    
 
 0.737
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
      
 0.684
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
      
 0.678
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 
 0.644
PRND
Prion-like protein doppel.
      
 0.636
WDR76
WD repeat domain 76.
      
 0.623
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
   
  
 0.487
MED27
Mediator complex subunit 27.
   
  
 0.485
BCO1
Beta-carotene oxygenase 1.
   
  
 0.482
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.