STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GKN1Gastrokine 1. (185 aa)    
Predicted Functional Partners:
ATP4A
Sodium/potassium-transporting ATPase subunit alpha.
   
  
 0.700
TFF2
Trefoil factor 2.
   
  
 0.679
LGALS4
Galectin.
   
  
 0.661
ATP4B
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
  
 0.648
TFF3
Trefoil factor 3.
      
 0.631
GKN2
Gastrokine 2.
  
  
0.624
TSC22D2
TSC22 domain family member 2.
   
  
 0.620
VSIG1
V-set and immunoglobulin domain containing 1.
   
  
 0.503
CBLIF
Cobalamin binding intrinsic factor.
   
  
 0.499
HFE
Homeostatic iron regulator; Belongs to the MHC class I family.
      
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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