NAA50 protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAA50

N(alpha)-acetyltransferase 50, NatE catalytic subunit. (169 aa)

Predicted Functional Partners:

NAA10

0.991

NAA25

0.982

NAA20

0.982

NAA15

0.973

NAA16

0.945

HYPK

0.916

NAA11

0.914

C1orf105

0.822

NAA40

0.808

MTIF2

0.792

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1orf105	MTIF2	ENSECAP00000039667	ENSECAP00000007404	Chromosome 1 open reading frame 105.	Mitochondrial translational initiation factor 2.	0.844
C1orf105	NAA50	ENSECAP00000039667	ENSECAP00000020661	Chromosome 1 open reading frame 105.	N(alpha)-acetyltransferase 50, NatE catalytic subunit.	0.822
HYPK	NAA10	ENSECAP00000006925	ENSECAP00000013004	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	0.851
HYPK	NAA11	ENSECAP00000006925	ENSECAP00000036603	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	0.851
HYPK	NAA15	ENSECAP00000006925	ENSECAP00000017864	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 15, NatA auxiliary subunit.	0.776
HYPK	NAA16	ENSECAP00000006925	ENSECAP00000046589	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 16, NatA auxiliary subunit.	0.811
HYPK	NAA20	ENSECAP00000006925	ENSECAP00000010421	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 20, NatB catalytic subunit.	0.661
HYPK	NAA25	ENSECAP00000006925	ENSECAP00000007188	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.631
HYPK	NAA40	ENSECAP00000006925	ENSECAP00000000886	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 40, NatD catalytic subunit.	0.634
HYPK	NAA50	ENSECAP00000006925	ENSECAP00000020661	Huntingtin interacting protein K.	N(alpha)-acetyltransferase 50, NatE catalytic subunit.	0.916
MTIF2	C1orf105	ENSECAP00000007404	ENSECAP00000039667	Mitochondrial translational initiation factor 2.	Chromosome 1 open reading frame 105.	0.844
MTIF2	NAA50	ENSECAP00000007404	ENSECAP00000020661	Mitochondrial translational initiation factor 2.	N(alpha)-acetyltransferase 50, NatE catalytic subunit.	0.792
NAA10	HYPK	ENSECAP00000013004	ENSECAP00000006925	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	Huntingtin interacting protein K.	0.851
NAA10	NAA11	ENSECAP00000013004	ENSECAP00000036603	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 11, NatA catalytic subunit.	0.579
NAA10	NAA15	ENSECAP00000013004	ENSECAP00000017864	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 15, NatA auxiliary subunit.	0.978
NAA10	NAA16	ENSECAP00000013004	ENSECAP00000046589	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 16, NatA auxiliary subunit.	0.898
NAA10	NAA20	ENSECAP00000013004	ENSECAP00000010421	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 20, NatB catalytic subunit.	0.727
NAA10	NAA25	ENSECAP00000013004	ENSECAP00000007188	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 25, NatB auxiliary subunit.	0.968
NAA10	NAA40	ENSECAP00000013004	ENSECAP00000000886	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 40, NatD catalytic subunit.	0.487
NAA10	NAA50	ENSECAP00000013004	ENSECAP00000020661	N(alpha)-acetyltransferase 10, NatA catalytic subunit.	N(alpha)-acetyltransferase 50, NatE catalytic subunit.	0.991