STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNPS1RNA binding protein with serine rich domain 1. (305 aa)    
Predicted Functional Partners:
SAP18
Sin3A associated protein 18.
   
 0.999
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.998
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.998
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.995
PNN
Pinin, desmosome associated protein.
   
 0.992
UPF1
UPF1 RNA helicase and ATPase.
   
 0.986
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
0.984
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 0.973
ALYREF
Aly/REF export factor.
   
 0.958
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.951
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.