STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO5BMyosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1850 aa)    
Predicted Functional Partners:
RAB11FIP2
RAB11 family interacting protein 2.
   
 0.998
RAB11A
RAB11A, member RAS oncogene family.
   
 0.972
RAB11B
RAB11B, member RAS oncogene family.
   
 0.877
BRF2
RAB11 family interacting protein 1.
   
 0.841
RAB10
RAB10, member RAS oncogene family.
   
 0.746
RAB25
RAB25, member RAS oncogene family.
   
 0.717
RAB8B
Uncharacterized protein.
    
 0.704
RAB11FIP5
RAB11 family interacting protein 5.
   
  
 0.666
EXOC4
Exocyst complex component 4.
    
 0.665
RILPL1
Rab interacting lysosomal protein like 1.
   
  
 0.642
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.