STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11H17orf49Ribonuclease K. (222 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
 0.670
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.626
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
     
 0.621
HMGXB4
HMG-box containing 4.
    
 0.615
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
     
 0.572
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
      
 0.517
CHD5
Chromodomain helicase DNA binding protein 5.
    
 
 0.510
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 
 0.500
ACTR5
Actin related protein 5; Belongs to the actin family.
      
 0.477
DPF3
Double PHD fingers 3.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.