STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR66WD repeat domain 66. (1097 aa)    
Predicted Functional Partners:
TEX12
Testis expressed 12.
   
 
 0.741
MEIOB
Meiosis specific with OB-fold.
    
 
 0.687
SPATA22
Spermatogenesis associated 22.
      
 0.676
TEX19
Testis expressed 19.
      
 0.675
KDM4D
Lysine demethylase 4D.
    
 0.660
BTG4
BTG anti-proliferation factor 4.
      
 0.633
DYDC1
DPY30 domain containing 1.
   
 0.575
BRDT
Bromodomain testis associated.
   
 
 0.561
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
 
      0.557
LOC100052388
Tubulin alpha 3d; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.543
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.