STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM6SF2Transmembrane 6 superfamily member 2. (376 aa)    
Predicted Functional Partners:
C5orf58
Chromosome 5 open reading frame 58.
      
 0.852
HAPLN4
Hyaluronan and proteoglycan link protein 4.
 
    
 0.826
MBOAT7
Membrane bound O-acyltransferase domain containing 7; Belongs to the membrane-bound acyltransferase family.
      
 0.812
HSD17B13
Hydroxysteroid 17-beta dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.804
PNPLA3
Patatin like phospholipase domain containing 3.
      
 0.797
PYGO1
Pygopus family PHD finger 1.
      
 0.744
KCNIP1
Potassium voltage-gated channel interacting protein 1.
   
  
 0.682
GABRE
Gamma-aminobutyric acid type A receptor epsilon subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.677
CILP2
Cartilage intermediate layer protein 2.
      
 0.655
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
      
 0.654
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.