STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX5Iroquois homeobox 5. (526 aa)    
Predicted Functional Partners:
IRX3
Iroquois homeobox 3.
  
  
0.883
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.594
ZFP36L1
ZFP36 ring finger protein like 1.
   
 
 0.574
RPGRIP1L
RPGRIP1 like.
    
 
 0.572
ARID5B
AT-rich interaction domain 5B.
    
 
 0.561
CCDC152
Coiled-coil domain containing 152.
   
  
 0.540
SRF
Serum response factor.
   
 
 0.530
TSHZ3
Teashirt zinc finger homeobox 3.
   
 0.526
PSMC3IP
PSMC3 interacting protein.
      
 0.517
BARHL2
BarH like homeobox 2.
   
 
 0.516
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.