STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6UB63_HORSEUncharacterized protein. (869 aa)    
Predicted Functional Partners:
WDR27
WD repeat domain 27.
   
  
 0.495
CACNA1E
Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.
   
  
 0.482
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
      
 0.473
REXO2
RNA exonuclease 2.
      
 0.473
PCDH8
Protocadherin 8.
      
 0.472
KPNB1
Karyopherin subunit beta 1.
      
 0.470
TTC4
Tetratricopeptide repeat domain 4.
      
 0.467
F2RL2
Coagulation factor II thrombin receptor like 2.
   
  
 0.466
NCK2
Cytoplasmic protein.
      
 0.463
GKAP1
Ubiquilin 1.
      
 0.447
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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