STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMC1Laminin subunit gamma 1. (1612 aa)    
Predicted Functional Partners:
LAMB1
Laminin subunit beta 1.
   
0.991
NID1
Nidogen 1.
   
 0.956
LAMA2
Laminin subunit alpha 2.
   
0.949
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.927
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.924
PRNP
Major prion protein; Belongs to the prion family.
    
  0.908
NID2
Nidogen 2.
   
 0.862
LAMA4
Laminin subunit alpha 4.
   
0.852
LAMA5
Laminin subunit alpha 5.
   
0.850
LAMA3
Laminin subunit alpha 3.
   
0.850
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.