STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD3PDZ domain containing 3. (505 aa)    
Predicted Functional Partners:
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
     
 0.886
WDR76
WD repeat domain 76.
    
 
 0.839
GRHPR
Glyoxylate and hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
      
 0.740
SHARPIN
SHANK associated RH domain interactor.
    
 0.726
LOC100071666
RanBP2-type domain-containing protein.
    
 0.723
SLC46A2
Solute carrier family 46 member 2.
      
 0.694
SPRYD7
SPRY domain containing 7.
    
 
 0.675
NDUFB6
NADH:ubiquinone oxidoreductase subunit B6.
      
 0.675
INTS3
Integrator complex subunit 3.
      
 0.671
PDZD4
PDZ domain containing 4.
   
 
 0.661
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.