STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100066738C-type lectin domain-containing protein. (242 aa)    
Predicted Functional Partners:
LSP1
Lymphocyte specific protein 1.
    
 0.923
KSR1
Kinase suppressor of ras 1.
    
 0.907
RHOA
Transforming protein RhoA-like protein.
   
  0.907
CD209
C-type lectin domain-containing protein.
  
 
 
0.903
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 
 0.902
PLK3
Serine/threonine-protein kinase PLK.
    
  0.901
ICAM3
Intercellular adhesion molecule 3.
   
 0.806
ICAM2
Intercellular adhesion molecule 2.
   
 
 0.644
CD151
Tetraspanin.
    
 0.547
TYRO3
TYRO3 protein tyrosine kinase.
    
 0.505
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.