Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | HNRNPA2B1 | ENSECAP00000005648 | ENSECAP00000033008 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Heterogeneous nuclear ribonucleoprotein A2/B1. | 0.550 |
| AGO2 | STAU1 | ENSECAP00000005648 | ENSECAP00000033890 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Staufen double-stranded RNA binding protein 1. | 0.670 |
| AGO2 | SYNCRIP | ENSECAP00000005648 | ENSECAP00000029401 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Synaptotagmin binding cytoplasmic RNA interacting protein. | 0.432 |
| AGO2 | YBX1 | ENSECAP00000005648 | ENSECAP00000021120 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Y-box binding protein 1. | 0.682 |
| HNRNPA2B1 | AGO2 | ENSECAP00000033008 | ENSECAP00000005648 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.550 |
| HNRNPA2B1 | HNRNPK | ENSECAP00000033008 | ENSECAP00000032974 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Heterogeneous nuclear ribonucleoprotein K. | 0.925 |
| HNRNPA2B1 | HNRNPU | ENSECAP00000033008 | ENSECAP00000005965 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Heterogeneous nuclear ribonucleoprotein U. | 0.899 |
| HNRNPA2B1 | SNRNP35 | ENSECAP00000033008 | ENSECAP00000004250 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Small nuclear ribonucleoprotein U11/U12 subunit 35. | 0.405 |
| HNRNPA2B1 | SYNCRIP | ENSECAP00000033008 | ENSECAP00000029401 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Synaptotagmin binding cytoplasmic RNA interacting protein. | 0.779 |
| HNRNPA2B1 | YBX1 | ENSECAP00000033008 | ENSECAP00000021120 | Heterogeneous nuclear ribonucleoprotein A2/B1. | Y-box binding protein 1. | 0.664 |
| HNRNPK | HNRNPA2B1 | ENSECAP00000032974 | ENSECAP00000033008 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoprotein A2/B1. | 0.925 |
| HNRNPK | HNRNPU | ENSECAP00000032974 | ENSECAP00000005965 | Heterogeneous nuclear ribonucleoprotein K. | Heterogeneous nuclear ribonucleoprotein U. | 0.995 |
| HNRNPK | SNRNP35 | ENSECAP00000032974 | ENSECAP00000004250 | Heterogeneous nuclear ribonucleoprotein K. | Small nuclear ribonucleoprotein U11/U12 subunit 35. | 0.619 |
| HNRNPK | SYNCRIP | ENSECAP00000032974 | ENSECAP00000029401 | Heterogeneous nuclear ribonucleoprotein K. | Synaptotagmin binding cytoplasmic RNA interacting protein. | 0.826 |
| HNRNPK | YBX1 | ENSECAP00000032974 | ENSECAP00000021120 | Heterogeneous nuclear ribonucleoprotein K. | Y-box binding protein 1. | 0.671 |
| HNRNPU | HNRNPA2B1 | ENSECAP00000005965 | ENSECAP00000033008 | Heterogeneous nuclear ribonucleoprotein U. | Heterogeneous nuclear ribonucleoprotein A2/B1. | 0.899 |
| HNRNPU | HNRNPK | ENSECAP00000005965 | ENSECAP00000032974 | Heterogeneous nuclear ribonucleoprotein U. | Heterogeneous nuclear ribonucleoprotein K. | 0.995 |
| HNRNPU | STAU1 | ENSECAP00000005965 | ENSECAP00000033890 | Heterogeneous nuclear ribonucleoprotein U. | Staufen double-stranded RNA binding protein 1. | 0.526 |
| HNRNPU | SYNCRIP | ENSECAP00000005965 | ENSECAP00000029401 | Heterogeneous nuclear ribonucleoprotein U. | Synaptotagmin binding cytoplasmic RNA interacting protein. | 0.923 |
| HNRNPU | YBX1 | ENSECAP00000005965 | ENSECAP00000021120 | Heterogeneous nuclear ribonucleoprotein U. | Y-box binding protein 1. | 0.698 |
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