Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GTPBP3 | GTPBP8 | ENSECAP00000016285 | ENSECAP00000010396 | GTP binding protein 3, mitochondrial. | GTP binding protein 8 (putative). | 0.881 |
GTPBP3 | MALSU1 | ENSECAP00000016285 | ENSECAP00000013657 | GTP binding protein 3, mitochondrial. | Mitochondrial assembly of ribosomal large subunit 1. | 0.789 |
GTPBP3 | MRPL17 | ENSECAP00000016285 | ENSECAP00000008082 | GTP binding protein 3, mitochondrial. | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.790 |
GTPBP3 | MRPL47 | ENSECAP00000016285 | ENSECAP00000016137 | GTP binding protein 3, mitochondrial. | Mitochondrial ribosomal protein L47. | 0.788 |
GTPBP3 | TARBP1 | ENSECAP00000016285 | ENSECAP00000021121 | GTP binding protein 3, mitochondrial. | TAR (HIV-1) RNA binding protein 1. | 0.685 |
GTPBP8 | GTPBP3 | ENSECAP00000010396 | ENSECAP00000016285 | GTP binding protein 8 (putative). | GTP binding protein 3, mitochondrial. | 0.881 |
GTPBP8 | MALSU1 | ENSECAP00000010396 | ENSECAP00000013657 | GTP binding protein 8 (putative). | Mitochondrial assembly of ribosomal large subunit 1. | 0.870 |
GTPBP8 | MRPL17 | ENSECAP00000010396 | ENSECAP00000008082 | GTP binding protein 8 (putative). | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.833 |
GTPBP8 | MRPL47 | ENSECAP00000010396 | ENSECAP00000016137 | GTP binding protein 8 (putative). | Mitochondrial ribosomal protein L47. | 0.791 |
GTPBP8 | TARBP1 | ENSECAP00000010396 | ENSECAP00000021121 | GTP binding protein 8 (putative). | TAR (HIV-1) RNA binding protein 1. | 0.676 |
MALSU1 | GTPBP3 | ENSECAP00000013657 | ENSECAP00000016285 | Mitochondrial assembly of ribosomal large subunit 1. | GTP binding protein 3, mitochondrial. | 0.789 |
MALSU1 | GTPBP8 | ENSECAP00000013657 | ENSECAP00000010396 | Mitochondrial assembly of ribosomal large subunit 1. | GTP binding protein 8 (putative). | 0.870 |
MALSU1 | MRPL17 | ENSECAP00000013657 | ENSECAP00000008082 | Mitochondrial assembly of ribosomal large subunit 1. | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.965 |
MALSU1 | MRPL47 | ENSECAP00000013657 | ENSECAP00000016137 | Mitochondrial assembly of ribosomal large subunit 1. | Mitochondrial ribosomal protein L47. | 0.949 |
MALSU1 | TARBP1 | ENSECAP00000013657 | ENSECAP00000021121 | Mitochondrial assembly of ribosomal large subunit 1. | TAR (HIV-1) RNA binding protein 1. | 0.690 |
MRPL17 | GTPBP3 | ENSECAP00000008082 | ENSECAP00000016285 | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | GTP binding protein 3, mitochondrial. | 0.790 |
MRPL17 | GTPBP8 | ENSECAP00000008082 | ENSECAP00000010396 | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | GTP binding protein 8 (putative). | 0.833 |
MRPL17 | MALSU1 | ENSECAP00000008082 | ENSECAP00000013657 | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Mitochondrial assembly of ribosomal large subunit 1. | 0.965 |
MRPL17 | MRPL47 | ENSECAP00000008082 | ENSECAP00000016137 | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Mitochondrial ribosomal protein L47. | 0.993 |
MRPL17 | PDCD11 | ENSECAP00000008082 | ENSECAP00000018688 | Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Programmed cell death 11. | 0.990 |
page 1 of 4