STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM210BFamily with sequence similarity 210 member B. (192 aa)    
Predicted Functional Partners:
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
   
  
 0.906
CHST4
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.868
MKLN1
Muskelin 1.
      
 0.774
SPEM2
SPEM family member 2.
      
 0.653
RNF151
Ring finger protein 151.
      
 0.649
KRT4
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
  
 0.631
ITSN1
Intersectin 1.
      
 0.573
ITM2C
Integral membrane protein 2C.
      
 0.560
ZNF382
Zinc finger protein 382.
   
  
 0.540
SPTBN2
Spectrin beta chain; Belongs to the spectrin family.
      
 0.526
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.