STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFHD1Uncharacterized protein. (237 aa)    
Predicted Functional Partners:
NMRAL1
NmrA like redox sensor 1.
    
 
 0.911
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
  
 0.778
PDLIM1
PDZ and LIM domain 1.
      
 0.692
EPHA3
EPH receptor A3.
   
  
 0.670
CORO1A
Coronin; Belongs to the WD repeat coronin family.
   
  
 0.666
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.492
ERMN
Ermin.
    
 
 0.470
LY6D
Lymphocyte antigen 6 family member D.
   
  
 0.443
TRIM67
Tripartite motif containing 67.
   
  
 0.442
PPP1R14A
Protein phosphatase 1 regulatory inhibitor subunit 14A.
   
  
 0.416
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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