STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX3RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. (392 aa)    
Predicted Functional Partners:
SRRM3
Serine/arginine repetitive matrix 3.
   
 
 0.730
ALDH1L1
10-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily.
      
 0.698
PTBP2
Polypyrimidine tract binding protein 2.
    
 0.677
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
 0.663
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
 0.617
CELF3
CUGBP Elav-like family member 3.
  
  
 0.601
CELF6
Uncharacterized protein.
  
  
 0.581
SLC1A3
Solute carrier family 1 member 3.
   
  
 0.580
OLIG1
Oligodendrocyte transcription factor 1.
   
  
 0.578
ELAVL3
ELAV-like protein; Belongs to the RRM elav family.
  
 0.572
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.