STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRP5NLR family pyrin domain containing 5. (1100 aa)    
Predicted Functional Partners:
ZP4
Zona pellucida glycoprotein 4.
   
 0.943
PADI3
Peptidyl arginine deiminase 4.
   
  
 0.939
ZAR1
Zygote arrest 1.
   
  
 0.795
GDF9
Growth differentiation factor 9.
   
 
 0.780
TLE6
TLE family member 6, subcortical maternal complex member.
    
 
 0.714
BMP15
Bone morphogenetic protein 15.
   
 
 0.685
BTG4
BTG anti-proliferation factor 4.
      
 0.672
NPM2
Nucleophosmin/nucleoplasmin 2.
   
 0.651
ZP2
Zona pellucida glycoprotein 2.
   
 0.640
NEFL
Neurofilament light; Belongs to the intermediate filament family.
   
  0.634
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.