STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMD1LIM domains containing 1. (671 aa)    
Predicted Functional Partners:
LATS1
Large tumor suppressor kinase 1.
    
 0.952
LATS2
Non-specific serine/threonine protein kinase.
    
 0.945
WTIP
WT1 interacting protein.
     
 
0.900
HAUS1
HAUS augmin-like complex subunit 1-like protein.
   
 0.682
HAUS3
HAUS augmin like complex subunit 3.
   
 0.680
HAUS8
HAUS augmin like complex subunit 8.
    
 0.642
VHL
Uncharacterized protein.
    
 0.584
HAUS5
HAUS augmin like complex subunit 5.
   
 0.568
ILK
Integrin linked kinase.
   
 
 0.567
RBM42
RNA binding motif protein 42.
   
 0.565
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.