STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD3Nuclear receptor binding SET domain protein 3. (1438 aa)    
Predicted Functional Partners:
BRD4
Bromodomain containing 4.
   
 
 0.965
PDZD8
PDZ domain containing 8.
   
  
 0.903
BRD3
Bromodomain containing 3.
   
 
 0.887
SMYD2
SET and MYND domain containing 2.
   
 
 0.718
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.680
BRDT
Bromodomain testis associated.
   
 
 0.678
CAMKMT
Calmodulin-lysine N-methyltransferase.
   
 
 0.678
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.678
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.672
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
    
 0.672
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.