STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VKORC1Vitamin K epoxide reductase complex subunit 1. (144 aa)    
Predicted Functional Partners:
TPMT
Thiopurine S-methyltransferase.
      
 0.775
NUDT15
Nudix hydrolase 15.
      
 0.705
TOMM5
Uncharacterized protein.
   
  
 0.563
TKFC
Triokinase and FMN cyclase.
      
 0.518
NIBAN3
Niban apoptosis regulator 3.
      
 0.513
GGCX
Gamma-glutamyl carboxylase.
   
  
 0.488
DPYD
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
   
  
 0.488
MRPL12
Ribosomal_L12_N domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.480
TRPT1
tRNA phosphotransferase 1.
   
  
 0.478
SLC46A1
Solute carrier family 46 member 1.
   
  
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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