STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAC8L1PLAC8 like 1. (178 aa)    
Predicted Functional Partners:
FAM172A
Family with sequence similarity 172 member A.
      
 0.907
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
   
  
 0.717
PCYOX1
Prenylcysteine oxidase 1.
   
 
 0.663
TDRD3
Tudor domain containing 3.
      
 0.625
PRDM10
PR/SET domain 10.
    
 0.581
ADSL
Uncharacterized protein.
      
 0.536
DDX24
DEAD-box helicase 24.
    
 0.508
OIT3
Oncoprotein induced transcript 3.
    
 0.498
CCNL2
Cyclin L2; Belongs to the cyclin family.
      
 0.491
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.491
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.