F6Z175_HORSE protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

F6Z175_HORSE

Reverse transcriptase domain-containing protein. (691 aa)

Predicted Functional Partners:

F7C182_HORSE

0.520

F6VET6_HORSE

0.518

F6VJ65_HORSE

0.511

F6SCV2_HORSE

0.511

F7CAE7_HORSE

0.508

F7CRI0_HORSE

0.507

F6YX12_HORSE

0.507

F6UIS4_HORSE

0.505

F6YXP9_HORSE

0.504

F7AP15_HORSE

0.504

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SCV2_HORSE	F6UIS4_HORSE	ENSECAP00000022035	ENSECAP00000006666	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.508
F6SCV2_HORSE	F6VET6_HORSE	ENSECAP00000022035	ENSECAP00000009862	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.506
F6SCV2_HORSE	F6VJ65_HORSE	ENSECAP00000022035	ENSECAP00000018308	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.504
F6SCV2_HORSE	F6YX12_HORSE	ENSECAP00000022035	ENSECAP00000014577	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.504
F6SCV2_HORSE	F6YXP9_HORSE	ENSECAP00000022035	ENSECAP00000002583	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.503
F6SCV2_HORSE	F6Z175_HORSE	ENSECAP00000022035	ENSECAP00000021955	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.511
F6SCV2_HORSE	F7AP15_HORSE	ENSECAP00000022035	ENSECAP00000011855	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.505
F6SCV2_HORSE	F7C182_HORSE	ENSECAP00000022035	ENSECAP00000000481	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.504
F6SCV2_HORSE	F7CAE7_HORSE	ENSECAP00000022035	ENSECAP00000000736	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.505
F6SCV2_HORSE	F7CRI0_HORSE	ENSECAP00000022035	ENSECAP00000005528	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.503
F6UIS4_HORSE	F6SCV2_HORSE	ENSECAP00000006666	ENSECAP00000022035	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.508
F6UIS4_HORSE	F6VJ65_HORSE	ENSECAP00000006666	ENSECAP00000018308	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.453
F6UIS4_HORSE	F6YX12_HORSE	ENSECAP00000006666	ENSECAP00000014577	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.431
F6UIS4_HORSE	F6YXP9_HORSE	ENSECAP00000006666	ENSECAP00000002583	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.504
F6UIS4_HORSE	F6Z175_HORSE	ENSECAP00000006666	ENSECAP00000021955	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.505
F6UIS4_HORSE	F7AP15_HORSE	ENSECAP00000006666	ENSECAP00000011855	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.504
F6UIS4_HORSE	F7CAE7_HORSE	ENSECAP00000006666	ENSECAP00000000736	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.429
F6UIS4_HORSE	F7CRI0_HORSE	ENSECAP00000006666	ENSECAP00000005528	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.505
F6VET6_HORSE	F6SCV2_HORSE	ENSECAP00000009862	ENSECAP00000022035	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.506
F6VET6_HORSE	F6VJ65_HORSE	ENSECAP00000009862	ENSECAP00000018308	Reverse transcriptase domain-containing protein.	Reverse transcriptase domain-containing protein.	0.504